Bookkeeping and payroll services for Mid-Missouri's small businesses.

Call or Text: (573) 965-7345

How to pay sales tax as a business in Missouri?

Start by registering for a sales tax license through the Missouri Department of Revenue. You can apply online through the MyTax Missouri portal at mytax.mo.gov. Registration is free and typically processes within a few business days. You cannot legally collect sales tax until you have an active license.

Once registered, you collect sales tax on taxable goods and services at the point of sale. Missouri’s state rate is 4.225%, but you also need to collect local taxes that vary by city and county. The total rate can range from about 5% to over 10% depending on the jurisdiction where the sale occurs. The Department of Revenue website has a rate lookup tool to find the exact rate for any Missouri address.

Your filing frequency depends on how much tax you collect. If you collect more than $500 monthly, you file monthly. Between $100 and $500, you file quarterly. Under $100, you can file annually. The DOR assigns your frequency when you register based on your estimated sales.

To actually file and pay, log into MyTax Missouri and select your sales tax account. Choose the filing period, enter your gross sales and taxable sales by location, and the system calculates what you owe. Pay electronically through the portal via ACH or credit card. You can mail a paper return with a check, but electronic filing is faster and creates a record you can reference later.

Due dates fall on the 20th of the month following your reporting period. Monthly filers reporting January sales pay by February 20th. Quarterly filers have until the 20th of the month following the quarter end. Late payments trigger penalties and interest immediately with no grace period.

Missouri requires you to track sales by location because local rates vary so much across the state. If you sell to customers in different cities or counties, you need to collect and report the correct local tax for each location. This is where many businesses struggle. Sales tax filing services can help if tracking multiple jurisdictions gets complicated.

Keep records of all sales, exempt sales, and tax collected. Missouri can audit back three years, and you need documentation to support your returns. Resale certificates from wholesale buyers and exemption certificates should be kept on file for every exempt transaction.

The process becomes routine once you understand it, but the first few filings often trip businesses up. Working with bookkeepers familiar with Missouri sales tax can help you set up tracking in QuickBooks so the data you need for filing is already organized when each due date arrives.

Full-Charge Bookkeeping for Mid-Mo's Businesses

The Next Step:
Get Your Quote

Tell us what you're dealing with. We'll listen, ask a few questions, and give you a straightforward price that meets your expectations.

More Questions

What is the best accounting software for dental offices?

QuickBooks Online works best for most dental offices. It handles insurance receivables, integrates with practice management systems, and gives you the reporting flexibility dental practices need.

Read answer

Why does my QuickBooks balance not match my bank balance?

Some difference is normal due to timing. Outstanding checks and deposits in transit create temporary gaps between your books and the bank. Persistent mismatches usually come from unrecorded fees, duplicate transactions, or a wrong starting balance.

Read answer

What do I do if reconciliation doesn't balance?

Start by checking your opening balance, then look for transposed numbers, duplicates, and missing transactions. Most reconciliation issues come down to a handful of common problems that a systematic review will uncover.

Read answer

What are the cash flow issues in small businesses?

Cash flow problems usually come down to timing. Money goes out faster than it comes in, creating stress even when the business is profitable on paper. The underlying issue is often lack of visibility into when cash actually moves.

Read answer

Do I have to collect sales tax if I sell online in Missouri?

If your business is located in Missouri and you sell taxable products to Missouri customers, yes. Your physical presence in the state creates the obligation whether sales happen in a store or through your website.

Read answer

What proof do I need for business expenses?

Keep receipts showing the amount, date, vendor, and what you bought. For meals and travel, also document the business purpose. Bank statements alone won't satisfy the IRS if you're audited.

Read answer

Full-charge bookkeeping for Mid-Missouri's small businesses. We serve owners from the Lake to Jeff City and Columbia who need their numbers to be as reliable as their work. Local, certified, efficient, and precise.

Client Reviews

5-Star Rated Firm

Social

  • QuickBooks Online Certified ProAdvisor Level 1
  • QuickBooks Online Certified ProAdvisor Level 2
  • Associate Digital Bookkeeper Certificate
  • Digital Bookkeeper Association Member

© 2026 Maple St Bookkeeping, LLC